Blame view
Utils.py
21 KB
2382daaac
first commit
|
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 |
#import paramiko
import re, random
#import boto
#import boto.ec2
#from euca2ools import Euca2ool, InstanceValidationError, ConnectionFailed, FileValidationError
from pysqlite2 import dbapi2 as sqlite
#import sys, os
import os, logging, errno
from ConfigParser import ConfigParser
#from scipy.interpolate import InterpolatedUnivariateSpline
from scipy.interpolate import UnivariateSpline
from collections import OrderedDict
from Instance import Instance
import numpy as np
class Utils(object):
'''
This class holds utility functions.
'''
def __init__(self,properties_file):
self.read_properties(properties_file)
self.mac_ip_mapping = {
|
6a9412d84
fixing ip less th...
|
24 25 26 27 28 29 30 31 32 33 |
"vm40.delab.csd.auth.gr":("e4:dd:4a:c2:36:33","192.168.1.40"),
"vm41.delab.csd.auth.gr":("73:3d:a0:aa:4e:bf","192.168.1.41"),
"vm42.delab.csd.auth.gr":("a2:da:bb:32:01:02","192.168.1.42"),
"vm43.delab.csd.auth.gr":("b2:50:a9:ac:12:19","192.168.1.43"),
"vm44.delab.csd.auth.gr":("31:65:3b:77:11:78","192.168.1.44"),
"vm45.delab.csd.auth.gr":("d2:a5:e5:33:cf:09","192.168.1.45"),
"vm46.delab.csd.auth.gr":("29:72:ff:69:cc:c7","192.168.1.46"),
"vm47.delab.csd.auth.gr":("5e:72:9d:12:25:3a","192.168.1.47"),
"vm48.delab.csd.auth.gr":("45:fa:7b:a3:c2:5b","192.168.1.48"),
"vm49.delab.csd.auth.gr":("99:0d:28:13:69:97","192.168.1.49"),
|
|
2382daaac
first commit
|
34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 |
"vm50.delab.csd.auth.gr":("a6:89:d4:1b:6d:21","192.168.1.50"),
"vm51.delab.csd.auth.gr":("36:86:86:3c:01:6d","192.168.1.51"),
"vm52.delab.csd.auth.gr":("44:66:11:45:bf:aa","192.168.1.52"),
"vm53.delab.csd.auth.gr":("f0:37:d7:e2:1f:d1","192.168.1.53"),
"vm54.delab.csd.auth.gr":("00:b8:a2:a0:af:70","192.168.1.54"),
"vm55.delab.csd.auth.gr":("9c:66:ab:89:32:cc","192.168.1.55"),
"vm56.delab.csd.auth.gr":("98:43:bd:58:34:b1","192.168.1.56"),
"vm57.delab.csd.auth.gr":("1c:45:09:a7:f4:e9","192.168.1.57"),
"vm58.delab.csd.auth.gr":("d6:40:d1:6a:e8:b8","192.168.1.58"),
"vm59.delab.csd.auth.gr":("e8:cb:ef:24:06:93","192.168.1.59"),
"vm60.delab.csd.auth.gr":("72:46:86:76:ed:bf","192.168.1.60"),
"vm61.delab.csd.auth.gr":("e4:44:2d:a2:c4:0f","192.168.1.61"),
"vm62.delab.csd.auth.gr":("34:5e:9e:ba:a7:cf","192.168.1.62"),
"vm63.delab.csd.auth.gr":("00:e5:78:bf:e5:b8","192.168.1.63"),
"vm64.delab.csd.auth.gr":("1e:72:d2:c8:f3:a7","192.168.1.64"),
"vm65.delab.csd.auth.gr":("4a:f0:da:97:65:ef","192.168.1.65"),
"vm66.delab.csd.auth.gr":("0c:a0:a8:54:f4:5a","192.168.1.66"),
"vm67.delab.csd.auth.gr":("f4:61:40:9a:11:8c","192.168.1.67"),
"vm68.delab.csd.auth.gr":("e2:c0:b4:8d:96:f8","192.168.1.68"),
"vm69.delab.csd.auth.gr":("de:f1:08:d6:62:62","192.168.1.69"),
"vm70.delab.csd.auth.gr":("86:50:cf:f8:10:ff","192.168.1.70"),
"vm71.delab.csd.auth.gr":("e2:15:66:9a:6a:65","192.168.1.71"),
"vm72.delab.csd.auth.gr":("18:56:1c:f7:5f:05","192.168.1.72"),
"vm73.delab.csd.auth.gr":("a6:53:94:09:7c:84","192.168.1.73"),
"vm74.delab.csd.auth.gr":("f6:d3:3d:53:ca:04","192.168.1.74"),
"vm75.delab.csd.auth.gr":("e8:c2:49:ac:52:4c","192.168.1.75"),
"vm76.delab.csd.auth.gr":("38:ac:45:43:20:22","192.168.1.76"),
"vm77.delab.csd.auth.gr":("86:48:d8:7a:16:c4","192.168.1.77"),
"vm78.delab.csd.auth.gr":("1a:00:1b:91:6c:bf","192.168.1.78"),
"vm79.delab.csd.auth.gr":("20:cf:31:a7:bf:c5","192.168.1.79"),
|
|
6a9412d84
fixing ip less th...
|
64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 |
"vm80.delab.csd.auth.gr":("36:9b:a9:49:76:05","192.168.1.80"),
"vm81.delab.csd.auth.gr":("C4:C2:A5:02:AD:E3","192.168.1.81"),
"vm82.delab.csd.auth.gr":("34:BF:73:B3:9D:EF","192.168.1.82"),
"vm83.delab.csd.auth.gr":("18:69:D3:06:C5:78","192.168.1.83"),
"vm84.delab.csd.auth.gr":("9A:4E:1E:EA:29:68","192.168.1.84"),
"vm85.delab.csd.auth.gr":("F6:EE:BC:3B:AB:AF","192.168.1.85"),
"vm86.delab.csd.auth.gr":("FE:1E:32:02:0F:56","192.168.1.86"),
"vm87.delab.csd.auth.gr":("6E:98:16:C7:8A:D3","192.168.1.87"),
"vm88.delab.csd.auth.gr":("3E:52:A7:B1:9B:7A","192.168.1.88"),
"vm89.delab.csd.auth.gr":("4C:04:95:BA:EC:82","192.168.1.89"),
"vm90.delab.csd.auth.gr":("E4:46:51:70:E1:BA","192.168.1.90"),
"vm91.delab.csd.auth.gr":("A2:66:B2:37:E0:6F","192.168.1.91"),
"vm92.delab.csd.auth.gr":("02:A9:83:64:4D:50","192.168.1.92"),
"vm93.delab.csd.auth.gr":("78:18:73:B0:44:71","192.168.1.93"),
"vm94.delab.csd.auth.gr":("08:D2:28:67:AD:8D","192.168.1.94"),
"vm95.delab.csd.auth.gr":("C0:44:25:C0:E5:C6","192.168.1.95"),
"vm96.delab.csd.auth.gr":("D2:89:2E:89:44:96","192.168.1.96"),
"vm97.delab.csd.auth.gr":("AA:7E:4A:3A:32:68","192.168.1.97"),
"vm98.delab.csd.auth.gr":("3E:B8:A0:96:BF:30","192.168.1.98"),
"vm99.delab.csd.auth.gr":("20:DA:56:86:29:13","192.168.1.99")
|
|
2382daaac
first commit
|
84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 |
}
self.free_ips = self.mac_ip_mapping.keys()
def getFree_dns_names(self, count, occupied=[]):
names = []
for ip in occupied:
if ip in self.free_ips:
self.free_ips.remove(ip)
if (count <= len(self.free_ips)):
for i in range(0,count):
names.append(self.free_ips.pop())
else:
print "no available dns_names"
return names
def return_instance_from_tuple(self, tuple):
instance = Instance(tuple[0], tuple[1], tuple[2], tuple[3], tuple[4], tuple[5], tuple[6], tuple[7], tuple[8], tuple[9], tuple[10],tuple[11]);
return instance
def query_instance_db(self, pattern):
""" A helpful search for the sqlite db - returns instances"""
search_field = None
search_field1 = None
if re.match('i-', pattern):
## looking by instance id
search_field = "id"
else:
if re.match('emi-', pattern):
## looking by image id
search_field = "image_id"
else:
if pattern.find(".") != -1:
## looking by ip
search_field = "public_dns_name"
search_field1 = "private_dns_name"
else:
## looking by state
search_field = "state"
instances = []
## read from the local database
con = sqlite.connect(self.db_file)
cur = con.cursor()
instancesfromDB = []
if search_field1 :
try:
instancesfromDB = cur.execute('select * from instances where ' + search_field +"=\"" +
pattern + "\" OR " + search_field1 + "=\"" + pattern + "\""
).fetchall()
except sqlite.DatabaseError:
con.rollback()
else:
try:
instancesfromDB = cur.execute('select * from instances where ' + search_field +"=\"" +
pattern + "\"").fetchall()
except sqlite.DatabaseError:
con.rollback()
cur.close()
con.close()
for instancefromDB in instancesfromDB:
instances.append(self.return_instance_from_tuple(instancefromDB))
return instances
def query_instance_db_using_id(self, pattern):
print "pattern: "+ str(pattern)
""" A helpful search for the sqlite db - returns instances"""
search_field = "ip_address"
instances = []
## read from the local database
con = sqlite.connect(self.db_file)
cur = con.cursor()
instancesfromDB = []
try:
instancesfromDB = cur.execute('select * from instances where ' + search_field +"=\"" +
pattern + "\"").fetchall()
except sqlite.DatabaseError:
con.rollback()
cur.close()
con.close()
for instancefromDB in instancesfromDB:
instances.append(self.return_instance_from_tuple(instancefromDB))
return instances
def refresh_instance_db(self, instances):
## Update instance DB with provided instances (removes all previous entries!)
con = sqlite.connect(self.db_file)
cur = con.cursor()
try:
cur.execute('delete from instances'
)
con.commit()
except sqlite.DatabaseError:
print "ERROR in truncate"
for instance in instances:
try:
cur.execute(""" insert into instances(id, image_id, dns_name, ip_address, mac_address, vpn,
state, instance_type, launch_time, placement, username, password)
values (?,?,?,?,?,?,?,?,?,?,?,?)""",
(instance.id, instance.image_id, instance.dns_name, instance.ip_address, instance.mac_address, instance.vpn, instance.state, instance.instance_type, instance.launch_time, instance.placement,instance.username,instance.password)
)
con.commit()
except sqlite.DatabaseError, e:
print e.message
print "ERROR in insert"
cur.close()
con.close()
def add_to_instance_db(self, instances):
## Update instance DB with provided instances (keeps previous entries!)
con = sqlite.connect(self.db_file)
cur = con.cursor()
for instance in instances:
try:
cur.execute(""" insert into instances(id, image_id, public_dns_name, private_dns_name,private_ip_address_2,state,
key_name, ami_launch_index, product_codes,instance_type,
launch_time, placement, kernel, ramdisk )
values (?,?,?,?,?,?,?,?,?,?,?,?,?,?)""",
(instance.id, instance.image_id,instance.public_dns_name,instance.private_dns_name,instance.private_ip_address_2, instance.state,
instance.key_name,instance.ami_launch_index,instance.product_codes,instance.instance_type,
instance.launch_time,instance.placement,instance.kernel,instance.ramdisk)
)
con.commit()
except sqlite.DatabaseError, e:
print e.message
print "ERROR in insert"
cur.close()
con.close()
########################################################
## Cluster DB functions
########################################################
def delete_cluster_from_db(self, clusterid = "default"):
con = sqlite.connect(self.db_file)
cur = con.cursor()
try:
cur.execute('delete from clusters where cluster_id=\"'+clusterid+"\"")
con.commit()
except sqlite.DatabaseError:
print "ERROR in truncate"
cur.close()
con.close()
def refresh_cluster_db(self, cluster=None):
## Update cluster DB with provided cluster (removes all previous entries!)
con = sqlite.connect(self.db_file)
cur = con.cursor()
try:
cur.execute('delete from clusters'
)
con.commit()
except sqlite.DatabaseError:
print "ERROR in truncate"
for (clusterkey,clustervalue) in cluster.items():
try:
cur.execute(""" insert into clusters(cluster_id, hostname, ip_address)
values (?,?,?)""",
(clusterkey, clustervalue.id, clustervalue.ip_address)
)
con.commit()
clusters = cur.execute('select * from clusters',).fetchall()
con.commit()
print "clusters refresh" + str(clusters);
except sqlite.DatabaseError, e:
print e.message
print "ERROR in insert"
cur.close()
con.close()
def get_cluster_from_db(self, cluster_id=None):
if not cluster_id:
print "Got to provide cluster id!!!"
else:
con = sqlite.connect(self.db_file)
cur = con.cursor()
try:
clusterfromDB = cur.execute('select * from clusters where cluster_id = \"'+cluster_id+"\""
).fetchall()
con.commit()
except sqlite.DatabaseError:
print "ERROR in select"
return None
if len(clusterfromDB) < 1:
print "Have not found the requested cluster - exiting."
else:
## build a cluster object
cluster = {}
for clusternode in clusterfromDB:
print (clusternode[2])
## query db to get the corresponding instance
instance = self.query_instance_db_using_id(clusternode[2])
## Populate cluster if instance in db
if instance:
cluster[clusternode[1]] = instance[0]
# print cluster
# print "Instance:", instance
# sys.stdout.flush()
return cluster
return None
def get_cluster(self, cluster_id=None):
if not cluster_id:
print "Got to provide cluster id!!!"
else:
con = sqlite.connect(self.db_file)
cur = con.cursor()
try:
clusterfromDB = cur.execute('select * from clusters where cluster_id = \"'+cluster_id+"\""
).fetchall()
con.commit()
except sqlite.DatabaseError:
print "ERROR in select"
return None
if len(clusterfromDB) < 1:
print "Have not found the requested cluster - exiting."
else:
return clusterfromDB
return None
def get_instance_from_cluster_db(self, cluster_id=None, hostname=None):
if (not cluster_id) or (not hostname):
print "Got to provide cluster id and hostname!!!"
else:
con = sqlite.connect(self.db_file)
cur = con.cursor()
try:
instanceFromClusterDB = cur.execute('select * from clusters where cluster_id = \"'+cluster_id+'\" and hostname = \"'+hostname+'\"'
).fetchall()
con.commit()
except sqlite.DatabaseError:
print "ERROR in select"
return None
if len(instanceFromClusterDB) < 1:
print "Have not found the requested instance fromcluster - exiting."
else:
return instanceFromClusterDB[0]
return None
def get_num_of_running_instances(self, cluster_id=None):
con = sqlite.connect(self.db_file)
cur = con.cursor()
try:
instanceFromClusterDB = cur.execute('select * from clusters where cluster_id = \"'+cluster_id+'\"').fetchall()
con.commit()
return len(instanceFromClusterDB)
except sqlite.DatabaseError:
print "ERROR in select"
return 0
def add_to_cluster_db(self, cluster=None, cluster_id=None):
## Add cluster to DB (check for existing records with the same id and remove)
con = sqlite.connect(self.db_file)
cur = con.cursor()
try:
cur.execute('delete from clusters where cluster_id = \"'+cluster_id+"\""
)
con.commit()
except sqlite.DatabaseError:
print "No previous entries"
for (clusterkey,clustervalue) in cluster.items():
try:
cur.execute(""" insert into clusters(cluster_id, hostname, ip_address)
values (?,?,?)""",
(cluster_id, clusterkey, clustervalue.ip_address)
)
con.commit()
except sqlite.DatabaseError, e:
print e.message
print "ERROR in insert"
cur.close()
con.close()
def rem_from_cluster_db(self, cluster_id=None, hostname=None):
## Add cluster to DB (check for existing records with the same id and remove)
con = sqlite.connect(self.db_file)
cur = con.cursor()
try:
cur.execute('delete from clusters where cluster_id = \"'+cluster_id+"\" and hostname = \""+hostname+"\""
)
con.commit()
except sqlite.DatabaseError:
print "Error in delete"
cur.close()
con.close()
def get_hostname(self, cluster_id=None, ip_address=None):
con = sqlite.connect(self.db_file)
cur = con.cursor()
try:
hostnames = cur.execute('select hostname from clusters where cluster_id = \"'+cluster_id+"\" and ip_address = \""+ip_address+"\""
).fetchall()
con.commit()
return hostnames[0]
except sqlite.DatabaseError:
print "Error in delete"
return []
cur.close()
con.close()
def mkdir_p(self,path):
try:
os.makedirs(path)
except OSError as exc: # Python >2.5
if exc.errno == errno.EEXIST and os.path.isdir(path):
pass
else: raise
def median(self, mylist):
sorts = sorted(mylist)
length = len(sorts)
if not length % 2:
return (sorts[length / 2] + sorts[length / 2 - 1]) / 2.0
return sorts[length / 2]
def interpolate_metrics(self, memory, state, cur_lambda):
state = str(state)
lambdaDict = {}
throughputList = []
latencyList = []
#the maximum from the smaller lambdas
max_smaller_lambda = [-1,0,0,0]
#the minimum from the greater lambdas
min_greater_lambda = [-1,0,0,0]
for j in memory[state]['arrayMeas']:
if cur_lambda <= j[0]:
if (j[0] <= min_greater_lambda[0] or min_greater_lambda[0] == -1):
min_greater_lambda = j
else:
if (j[0] >= max_smaller_lambda[0] or max_smaller_lambda[0] == -1):
max_smaller_lambda = j
if j[0] in lambdaDict:
lambdaDict[j[0]][0].append(j[1])
lambdaDict[j[0]][1].append(j[2])
else:
lambdaDict[j[0]] = ([j[1]],[j[2]])
ordered_lambda = OrderedDict(sorted(lambdaDict.items()))
throughputList = []
latencyList = []
for l in ordered_lambda.values():
throughputList.append(self.median(l[0]))
latencyList.append(self.median(l[1]))
if (min_greater_lambda[0] == -1) or (max_smaller_lambda[0] == -1):
# print state
# print cur_lambda
# print str(memory[state]['arrayMeas'])
# print "ordered set -> " + str(ordered_lambda)
fc_thr = UnivariateSpline(ordered_lambda.keys(),throughputList, k=1)
thr = fc_thr(cur_lambda)
fc_lat = UnivariateSpline(ordered_lambda.keys(),latencyList, k=1)
lat = fc_lat(cur_lambda)
else:
thr = np.interp(cur_lambda,ordered_lambda.keys(),throughputList)
lat = np.interp(cur_lambda,ordered_lambda.keys(),latencyList)
return (thr, lat)
# def thr(self, vm, inlambda):
# if(3000*vm<inlambda) :
# return (3000.0*vm - 0.03*inlambda + self.myR(-0.05*(3000.0*vm - 0.03*inlambda),0.0));
# else:
# return inlambda+self.myR(-0.1*inlambda, 0.0);
# def lat(self, vm, inlambda):
# if(8000*vm<inlambda):
# return (4*vm)+0.00001*(inlambda-8000.0*vm)*(inlambda-8000.0*vm)+self.myR(0.0, 0.000001*(inlambda-8000.0*vm)*(inlambda-8000.0*vm));
# else:
# return (0.0005*inlambda + self.myR(0.0, 10.0));
# def myR(self, apo,ews):
# return ((ews-apo)*random.uniform(0,1))+apo;
def read_properties(self, property_file="Coordinator.properties"):
""" process properties file """
## Reads the configuration properties
cfg = ConfigParser()
cfg.read(property_file)
self.install_dir = cfg.get("config", "install_dir")
self.logs_folder_name = 'logs'
#self.euca_rc_dir = cfg.get("config", "euca_rc_dir")
self.bucket_name = cfg.get("config", "bucket_name")
self.master_bucket_name = cfg.get("config", "master_bucket_name")
self.instance_type = cfg.get("config", "instance_type")
self.master_instance_type = cfg.get("config", "master_instance_type")
self.cluster_name = cfg.get("config", "cluster_name")
self.hostname_template = cfg.get("config", "hostname_template")
self.cluster_type = cfg.get("config", "cluster_type")
self.db_file = cfg.get("config", "db_file")
self.cloud_api_type = cfg.get("config", "cloud_api_type")
self.rabbit_maxmem = int(cfg.get("config", "rabbit_maxmem"))
self.panther_maxmem = int(cfg.get("config", "panther_maxmem"))
self.deer_maxmem = int(cfg.get("config", "deer_maxmem"))
self.anaconda_maxmem = int(cfg.get("config", "anaconda_maxmem"))
self.initial_cluster_size = int(cfg.get("config", "initial_cluster_size"))
self.ownerTag = cfg.get("config", "ownerTag")
self.reconfigure = eval(cfg.get("config", "reconfigure"))
if(self.cloud_api_type == 'ganeti'):
self.disk = self.instance_type.split('_')[0]
self.cpu = self.instance_type.split('_')[1]
self.ram = self.instance_type.split('_')[2]
self.m_disk = self.master_instance_type.split('_')[0]
self.m_cpu = self.master_instance_type.split('_')[1]
self.m_ram = self.master_instance_type.split('_')[2]
self.logging_level = logging.DEBUG if cfg.get("config","logging_level") == "debug" else logging.INFO;
|